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	Issue Date	Title	Author(s)
1	Jan-2007	Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and information theory	Sayyed-Ahmad, Abdallah; Tuncay, Kagan; Ortoleva, Peter J.
2	Aug-2009	Relative free energy of binding between antimicrobial peptides and SDS or DPC micelles	Sayyed-Ahmad, Abdallah; Khandelia, Himanshu; Kaznessis, Yiannis N.
3	Mar-2009	Determining the orientation of the Beta-hairpin antimicrobial peptide Protegrin-1 in a DLPC lipid bilayer using an implicit solvent-membrane model	Sayyed-Ahmad, Abdallah; Kaznessis, Yiannis
4	Sep-2003	Toward automated cell model development through information theory	Sayyed-Ahmad, Abdallah; Tuncay, Kagan; Ortoleva, Peter J.
5	Jan-2009	Poisson-Nernst-Planck models of nonequilibrium ion electrodiffusion through a protegrin transmembrane pore	Bolintineanu, Dan S.; Sayyed-Ahmad, Abdallah; Davis, H Ted
6	Sep-2007	Basin model inversion using information theory and seismic data	Lee, Jejung; Sayyed-Ahmad, Abdallah; Sheen, Dong-Hoon
7	Mar-2008	On the nature of antimicrobial activity: a model for Protegrin-1	Langham, Allison A.; Sayyed-Ahmad, Abdallah; Kaznessis, Yiannis N.
8	Jul-2004	Karyote physico-chemical genome, proteome, metabolome cell modeling system	Ortoleva, P.; Berry, E.; Brun, Y.; Fan, J.; Fontus, M.; Hubbard, K; Jaqaman, K.; Jarymowycz, L.; Navid, A.; Sayyed-Ahmad, Abdallah; Shreif, Z.; Stanley, F.; Tuncay, K.; Weitzke, E.; Wu, L-C.
9	Mar-2004	Efficient solution technique for solving Poisson Boltzmann equation	Sayyed-Ahmad, Abdallah; Tuncay, Kagan; Ortoleva, Peter J.
10	Feb-2008	Poisson-Boltzmann theory of bionanosystems	Sayyed-Ahmad, Abdallah; Miao, Yinglong; Ortoleva, Peter J.